Paper 13305-57
Paper 13305-57
Open chrono-morph viewer: advanced, open-source, high-dimensional image visualization for the OCT community
29 January 2025 • 10:45 AM - 11:00 AM PST | Moscone South, Room 203 (Level 2)
Abstract
Open Chrono-Morph Viewer (OCMV) is a new open-source bioimage informatics platform that enables advanced visualization of high-dimensionality OCT images. Built in Python, OCMV is a standalone software with a graphical user interface for real-time interactive visualization and an application programming interface for animation. OCMV efficiently handles large sequences of volumes with two timescales to accommodate longitudinal studies. Due to high levels of speckle noise, seeing inside an OCT volume requires cutting away part of the volume, yet the traditional clipping plane cannot reveal convoluted structures within the volume. OCMV features novel algorithms and methods, including a clipping spline that provides interactive, dynamic, smooth non-planar cutaway views inside a volume.
Presenter
Stevens Institute of Technology (United States)
Andre works at the Stevens Institute of Technology as a Research Associate, continuing his undergraduate research in developmental biology. His B.E. is in Biomedical Engineering, and his background consists of computer programming, 3D modeling, and digital image processing. He aspires to apply his computational skills to improve our understanding of cellular and biological systems, with the goal of extending the healthy human lifespan. In his free time, he likes to cook, keeps up to date with the latest machine learning research, dreams up engineering solutions to improve his fencing equipment, and learns entrepreneurship.